BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E01SP1|AL425127
(1000 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1467 924 0.0
3x_Contig943 770 0.0
3x_Contig1682 181 3e-45
>3x_Contig1467
Length = 7717
Score = 924 bits (466), Expect = 0.0
Identities = 466/466 (100%)
Strand = Plus / Minus
Query: 1 gatcaagctttagtcctcgcttagacaggttaggacaggacatgacatggaaggaaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gatcaagctttagtcctcgcttagacaggttaggacaggacatgacatggaaggaaattc 421
Query: 61 actcaacagaatatcagacagcgcccgaatggtctgacctgaaccgtgtagtacccagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 actcaacagaatatcagacagcgcccgaatggtctgacctgaaccgtgtagtacccagcc 361
Query: 121 tagctcccaacactatcattacgtatcgaatcacacagaagagaacctgaaaagaaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tagctcccaacactatcattacgtatcgaatcacacagaagagaacctgaaaagaaaagt 301
Query: 181 ggtgcttttgtggtggatcgttatggaacatctgcaatttgcaaagtgcagaaaataggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggtgcttttgtggtggatcgttatggaacatctgcaatttgcaaagtgcagaaaataggg 241
Query: 241 aaaaagaaaactaaaatagaattttaggaagcttctcggtctttctaagggcgaaaagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aaaaagaaaactaaaatagaattttaggaagcttctcggtctttctaagggcgaaaagta 181
Query: 301 agataattgtgcgatgagctgggattattatagaacgagaccgagaattagttaacatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agataattgtgcgatgagctgggattattatagaacgagaccgagaattagttaacatat 121
Query: 361 gggtttgcattcgaattaaattagcaaagtgagtttttcatggttttcaattaggggaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gggtttgcattcgaattaaattagcaaagtgagtttttcatggttttcaattaggggaag 61
Query: 421 ggtatagaagcctatagaatactgtagaataggggagaagttagga 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ggtatagaagcctatagaatactgtagaataggggagaagttagga 15
>3x_Contig943
Length = 2708
Score = 770 bits (388), Expect = 0.0
Identities = 412/417 (98%), Gaps = 4/417 (0%)
Strand = Plus / Plus
Query: 588 attttattattctaataattcaattgatatactagtcgtaacgaatcaagcaaaaggtat 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 attttattattctaataattcaattgatatactagtcgtaacgaatcaagcaaaaggtat 66
Query: 648 tatattagtcctaaaaccactattataataagtctaaagaagagcaaagcaataatcaac 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tatattagtcctaaaaccactattataataagtctaaagaagagcaaagcaataatcaac 126
Query: 708 tagtaaagaaggaagaacaaatatgtcaaaagctgttggtattgatttaggtactactta 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tagtaaagaaggaagaacaaatatgtcaaaagctgttggtattgatttaggtactactta 186
Query: 768 ttcgtgtgttgcacatttcaccaacgatcgtgtggaaattattgccaacgatcaaggtaa 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ttcgtgtgttgcacatttcaccaacgatcgtgtggaaattattgccaacgatcaaggtaa 246
Query: 828 tagaacaactccatcttacgttgcctttaccgatacagaaagattgattggtgatgcagc 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tagaacaactccatcttacgttgcctttaccgatacagaaagattgattggtgatgcagc 306
Query: 888 aaagaaccaagctgctatcaacccatcaaacactgttttcgatgctaagcgtttgattgg 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aaagaaccaagctgctatcaacccatcaaacactgttttcgatgctaagcgtttgattgg 366
Query: 948 tcgtaaatatgatgat-cagaagtac-twacgatgctaagcatt--ccattcaagat 1000
|||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||
Sbjct: 367 tcgtaaatatgatgatccagaagtacttaacgatgctaagcatttcccattcaagat 423
>3x_Contig1682
Length = 16889
Score = 181 bits (91), Expect = 3e-45
Identities = 187/219 (85%)
Strand = Plus / Plus
Query: 730 atgtcaaaagctgttggtattgatttaggtactacttattcgtgtgttgcacatttcacc 789
||||| || ||||||||||||||||| ||||| ||||| || |||||||| || || |
Sbjct: 475 atgtctaaggctgttggtattgatttgggtaccacttactcatgtgttgctcacttttct 534
Query: 790 aacgatcgtgtggaaattattgccaacgatcaaggtaatagaacaactccatcttacgtt 849
||||| ||||| |||||| | || ||||| |||||||| ||||| || ||||||| ||
Sbjct: 535 aacgaccgtgtcgaaattttggctaacgaccaaggtaacagaactaccccatcttttgtc 594
Query: 850 gcctttaccgatacagaaagattgattggtgatgcagcaaagaaccaagctgctatcaac 909
|| || ||||| || |||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 595 gctttcaccgacactgaaagattgattggtgatgctgccaagaaccaagctgctatgaac 654
Query: 910 ccatcaaacactgttttcgatgctaagcgtttgattggt 948
||| | |||||||||||||||||||||||||||||||||
Sbjct: 655 ccagccaacactgttttcgatgctaagcgtttgattggt 693
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7549
Number of Sequences: 1807
Number of extensions: 7549
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 3
length of query: 1000
length of database: 10,358,551
effective HSP length: 16
effective length of query: 984
effective length of database: 10,329,639
effective search space: 10164364776
effective search space used: 10164364776
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)